PH01000062G0010's details annotation
1.Annotation
ICBR annotation: ZOS2-16 - C2H2 zinc finger protein
Blast result AT3G27970 : 5.00E-136
Blast annotation: Exonuclease family protein
2.Location
Scaffold: PH01000062
Strand: +
| Region | Start | End |
| gene | 7111 | 9475 |
| mRNA | 7111 | 9475 |
| exon | 7111 | 7233 |
| exon | 7403 | 7554 |
| exon | 7694 | 7824 |
| exon | 8030 | 8199 |
| exon | 8423 | 8632 |
| exon | 8776 | 8856 |
| exon | 8954 | 9475 |
| CDS | 7199 | 7233 |
| CDS | 7403 | 7554 |
| CDS | 7694 | 7824 |
| CDS | 8030 | 8199 |
| CDS | 8423 | 8632 |
| CDS | 8776 | 8856 |
| CDS | 8954 | 9182 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00929.23 | RNase_T | 138 | 269 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003676 | nucleic acid binding |
| GO:0004527 | exonuclease activity |
| GO:0005622 | intracellular |
| GO:0008270 | zinc ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.