PH01000066G1950's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT1G34340 : 2.80E-88
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01000066
Strand: -
| Region | Start | End |
| gene | 1339544 | 1343866 |
| mRNA | 1339544 | 1343866 |
| exon | 1339544 | 1339785 |
| exon | 1340249 | 1340326 |
| exon | 1341185 | 1341307 |
| exon | 1341474 | 1341582 |
| exon | 1341824 | 1341919 |
| exon | 1342662 | 1342751 |
| exon | 1343032 | 1343866 |
| CDS | 1339696 | 1339785 |
| CDS | 1340249 | 1340326 |
| CDS | 1341185 | 1341307 |
| CDS | 1341474 | 1341582 |
| CDS | 1341824 | 1341919 |
| CDS | 1342662 | 1342751 |
| CDS | 1343032 | 1343282 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12146.7 | Hydrolase_4 | 147 | 240 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004091 | carboxylesterase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.