PH01000067G1590's details annotation
1.Annotation
ICBR annotation: glutaredoxin family protein, expressed
Blast result AT5G42150 : 4.00E-102
Blast annotation: Glutathione S-transferase family protein
2.Location
Scaffold: PH01000067
Strand: -
| Region | Start | End |
| gene | 1228312 | 1233615 |
| mRNA | 1228312 | 1233615 |
| exon | 1228312 | 1228988 |
| exon | 1229107 | 1229274 |
| exon | 1230168 | 1230262 |
| exon | 1231990 | 1232065 |
| exon | 1232191 | 1232325 |
| exon | 1232873 | 1233615 |
| CDS | 1228828 | 1228988 |
| CDS | 1229107 | 1229274 |
| CDS | 1230168 | 1230262 |
| CDS | 1231990 | 1232065 |
| CDS | 1232191 | 1232325 |
| CDS | 1232873 | 1233191 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13417.5 | GST_N_3 | 93 | 160 |
| PF00043.24 | GST_C | 246 | 306 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Arachidonic acid metabolism | microsomal prostaglandin-E synthase 2 [EC:5.3.99.3] | ko00590 | K05309 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009055 | electron carrier activity |
| GO:0015035 | protein disulfide oxidoreductase activity |
| GO:0045454 | cell redox homeostasis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.