PH01000068G1240's details annotation
1.Annotation
ICBR annotation: X8 domain containing protein, expressed
Blast result AT3G13560 : 6.40E-28
Blast annotation: O-Glycosyl hydrolases family 17 protein
2.Location
Scaffold: PH01000068
Strand: +
| Region | Start | End |
| gene | 828911 | 832704 |
| mRNA | 828911 | 832704 |
| exon | 828911 | 830432 |
| exon | 830839 | 831207 |
| exon | 831296 | 831323 |
| exon | 832420 | 832704 |
| CDS | 830366 | 830432 |
| CDS | 830839 | 831207 |
| CDS | 831296 | 831323 |
| CDS | 832420 | 832582 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001811 | cytokinesis microtubule cytoskeleton organization, microtubule binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07983.12 | X8 | 68 | 139 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.