PH01000070G0720's details annotation
1.Annotation
ICBR annotation: chaperone protein dnaJ 10, putative, expressed
Blast result AT1G21080 : 1.50E-79
Blast annotation: DNAJ heat shock N-terminal domain-containing protein
2.Location
Scaffold: PH01000070
Strand: -
| Region | Start | End |
| gene | 416248 | 418728 |
| mRNA | 416248 | 418728 |
| exon | 416248 | 416864 |
| exon | 416957 | 417037 |
| exon | 417153 | 417331 |
| exon | 417461 | 417619 |
| exon | 417850 | 417979 |
| exon | 418498 | 418728 |
| CDS | 416685 | 416864 |
| CDS | 416957 | 417037 |
| CDS | 417153 | 417331 |
| CDS | 417461 | 417619 |
| CDS | 417850 | 417979 |
| CDS | 418498 | 418605 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14308.5 | DnaJ-X | 39 | 233 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.