Annotation of co-expression genes

PH01000076G0950's details annotation

1.Annotation

ICBR annotation: phosphoribosyl transferase, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000076
Strand: +

RegionStartEnd
gene558377560335
mRNA558377560335
exon558377559288
exon559458559531
exon559737560335
CDS559102559288
CDS559458559531
CDS559737560315

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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