PH01000085G0310's details annotation
1.Annotation
ICBR annotation: adenylate kinase isoenzyme 6, putative, expressed
Blast result AT5G60340 : 1.20E-65
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000085
Strand: +
| Region | Start | End |
| gene | 345022 | 346594 |
| mRNA | 345022 | 346594 |
| exon | 345022 | 346082 |
| exon | 346180 | 346594 |
| CDS | 345879 | 346082 |
| CDS | 346180 | 346200 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13238.5 | AAA_18 | 14 | 134 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Basal transcription factors | transcription initiation factor TFIID subunit 9 / adenylate kinase | ko03022 | K14535 |
| Ribosome biogenesis in eukaryotes | transcription initiation factor TFIID subunit 9 / adenylate kinase | ko03008 | K14535 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.