PH01000095G0540's details annotation
1.Annotation
ICBR annotation: peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
Blast result AT4G19830 : 3.50E-69
Blast annotation: FKBP-like peptidyl-prolyl cis-trans isomerase family protein
2.Location
Scaffold: PH01000095
Strand: -
| Region | Start | End |
| gene | 400063 | 402965 |
| mRNA | 400063 | 402965 |
| exon | 400063 | 400835 |
| exon | 401122 | 401238 |
| exon | 401968 | 402090 |
| exon | 402363 | 402965 |
| CDS | 400674 | 400835 |
| CDS | 401122 | 401238 |
| CDS | 401968 | 402090 |
| CDS | 402363 | 402620 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00254.27 | FKBP_C | 80 | 201 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.