Gene details

Annotation of co-expression genes

PH01000095G1010's details annotation

1.Annotation

ICBR annotation: DSHCT domain containing protein, expressed

Blast result AT2G06990 : 0.00E+00
Blast annotation: RNA helicase, ATP-dependent, SK12/DOB1 protein

2.Location

Scaffold: PH01000095
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000495	SNF2 Transcription_Regulator(from iTAK) proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair, ribosome biogenesis, eukaryotic translation initiation factor 3 complex, nucleolus, helicase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
RNA degradation	ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]	ko03018	K12598

10.Gene Ontology

GO Accession	GO Annotation
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding
GO:0008026	ATP-dependent helicase activity
GO:0016817	hydrolase activity, acting on acid anhydrides
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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