Annotation of co-expression genes

PH01000096G1810's details annotation

1.Annotation

ICBR annotation: prefoldin, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000096
Strand: +

RegionStartEnd
gene11969801199389
mRNA11969801199389
exon11969801197303
exon11986231198963
exon11991611199389
CDS11972941197303
CDS11986231198963
CDS11991611199256

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0005783endoplasmic reticulum
GO:0006886intracellular protein transport
GO:0016021integral to membrane

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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