PH01000098G1570's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT1G14020 : 6.00E-172
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01000098
Strand: +
| Region | Start | End |
| gene | 978674 | 982336 |
| mRNA | 978674 | 982336 |
| exon | 978674 | 979419 |
| exon | 980104 | 980171 |
| exon | 980302 | 980390 |
| exon | 980647 | 980809 |
| exon | 980896 | 981185 |
| exon | 981265 | 981469 |
| exon | 981552 | 981709 |
| exon | 981906 | 982336 |
| CDS | 979191 | 979419 |
| CDS | 980104 | 980171 |
| CDS | 980302 | 980390 |
| CDS | 980647 | 980809 |
| CDS | 980896 | 981185 |
| CDS | 981265 | 981469 |
| CDS | 981552 | 981709 |
| CDS | 981906 | 982152 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 84 | 402 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.