PH01000104G0200's details annotation
1.Annotation
ICBR annotation: heat shock protein, putative, expressed
Blast result AT2G04030 : 0.00E+00
Blast annotation: Chaperone protein htpG family protein
2.Location
Scaffold: PH01000104
Strand: +
| Region | Start | End |
| gene | 164285 | 169297 |
| mRNA | 164285 | 169297 |
| exon | 164285 | 164915 |
| exon | 165326 | 165399 |
| exon | 165510 | 165635 |
| exon | 165716 | 165809 |
| exon | 165933 | 166016 |
| exon | 166114 | 166257 |
| exon | 166331 | 166447 |
| exon | 166552 | 166596 |
| exon | 166694 | 166771 |
| exon | 166943 | 167047 |
| exon | 167128 | 167268 |
| exon | 167375 | 167467 |
| exon | 167585 | 167662 |
| exon | 167736 | 167990 |
| exon | 168076 | 168178 |
| exon | 168265 | 168436 |
| exon | 168528 | 168633 |
| exon | 168734 | 168823 |
| exon | 168917 | 169297 |
| CDS | 164673 | 164915 |
| CDS | 165326 | 165399 |
| CDS | 165510 | 165635 |
| CDS | 165716 | 165809 |
| CDS | 165933 | 166016 |
| CDS | 166114 | 166257 |
| CDS | 166331 | 166447 |
| CDS | 166552 | 166596 |
| CDS | 166694 | 166771 |
| CDS | 166943 | 167047 |
| CDS | 167128 | 167268 |
| CDS | 167375 | 167467 |
| CDS | 167585 | 167662 |
| CDS | 167736 | 167990 |
| CDS | 168076 | 168178 |
| CDS | 168265 | 168436 |
| CDS | 168528 | 168633 |
| CDS | 168734 | 168823 |
| CDS | 168917 | 169117 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02518.25 | HATPase_c | 97 | 256 |
| PF00183.17 | HSP90 | 261 | 757 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Protein processing in endoplasmic reticulum | heat shock protein 90kDa beta | ko04141 | K09487 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0006457 | protein folding |
| GO:0006950 | response to stress |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.