PH01000113G0600's details annotation
1.Annotation
ICBR annotation: sucrose transporter, putativ, expressed
Blast result AT2G02860 : 2.00E-135
Blast annotation: sucrose transporter 2
2.Location
Scaffold: PH01000113
Strand: -
| Region | Start | End |
| gene | 381054 | 389951 |
| mRNA | 381054 | 389951 |
| exon | 381054 | 384039 |
| exon | 384147 | 384190 |
| exon | 384286 | 384367 |
| exon | 384423 | 384680 |
| exon | 384737 | 384880 |
| exon | 385010 | 385180 |
| exon | 385352 | 385427 |
| exon | 385516 | 385615 |
| exon | 385740 | 385773 |
| exon | 385859 | 385943 |
| exon | 386034 | 386098 |
| exon | 386691 | 386756 |
| exon | 389368 | 389951 |
| CDS | 383869 | 384039 |
| CDS | 384147 | 384190 |
| CDS | 384286 | 384367 |
| CDS | 384423 | 384680 |
| CDS | 384737 | 384880 |
| CDS | 385010 | 385180 |
| CDS | 385352 | 385427 |
| CDS | 385516 | 385615 |
| CDS | 385740 | 385773 |
| CDS | 385859 | 385943 |
| CDS | 386034 | 386098 |
| CDS | 386691 | 386756 |
| CDS | 389368 | 389565 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.