PH01000115G0180's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G14170 : 5.10E-84
Blast annotation: Plant protein of unknown function (DUF936)
2.Location
Scaffold: PH01000115
Strand: +
| Region | Start | End |
| gene | 108263 | 113099 |
| mRNA | 108263 | 113099 |
| exon | 108263 | 110455 |
| exon | 110749 | 111105 |
| exon | 111524 | 111615 |
| exon | 111889 | 113099 |
| CDS | 109808 | 110455 |
| CDS | 110749 | 111105 |
| CDS | 111524 | 111615 |
| CDS | 111889 | 112501 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06075.11 | DUF936 | 4 | 244 |
| PF06075.11 | DUF936 | 237 | 391 |
| PF06075.11 | DUF936 | 406 | 562 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.