Gene details

Annotation of co-expression genes

PH01000129G0820's details annotation

1.Annotation

ICBR annotation: ras-related protein, putative, expressed

Blast result AT5G65270 : 2.90E-92
Blast annotation: RAB GTPase homolog A4A

2.Location

Scaffold: PH01000129
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001419	nucleocytoplasmic transport, GTP_catabolic_process small GTPase mediated signal transduction, protein transport, signal transduction, intracellular protein transport, cellular carbohydrate metabolic process, malate metabolic process, GTPase activity, GTP binding, malate dehydrogenase activity, L-malate dehydrogenase activity, intracellular, Pyruvate_metabolism Carbon_fixation_in_photosynthetic_organisms Glyoxylate_and_dicarboxylate_metabolism Citrate_cycle_(TCA_cycle) membrane,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00071.21	Ras	13	173

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005622	intracellular
GO:0006184	GTP catabolic process
GO:0006886	intracellular protein transport
GO:0006913	nucleocytoplasmic transport
GO:0007165	signal transduction
GO:0007264	small GTPase mediated signal transduction
GO:0015031	protein transport
GO:0016020	membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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