PH01000130G1610's details annotation
1.Annotation
ICBR annotation: nodulin, putative, expressed
Blast result AT5G45275 : 3.00E-141
Blast annotation: Major facilitator superfamily protein
2.Location
Scaffold: PH01000130
Strand: -
| Region | Start | End |
| gene | 1020882 | 1023779 |
| mRNA | 1020882 | 1023779 |
| exon | 1020882 | 1022065 |
| exon | 1022152 | 1023026 |
| exon | 1023441 | 1023779 |
| CDS | 1021567 | 1022065 |
| CDS | 1022152 | 1023026 |
| CDS | 1023441 | 1023773 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06813.12 | Nodulin-like | 11 | 261 |
| PF03209.14 | PUCC | 375 | 469 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.