PH01000157G1260's details annotation
1.Annotation
ICBR annotation: OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed
Blast result AT2G01270 : 9.00E-113
Blast annotation: quiescin-sulfhydryl oxidase 2
2.Location
Scaffold: PH01000157
Strand: +
| Region | Start | End |
| gene | 809397 | 816561 |
| mRNA | 809397 | 816561 |
| exon | 809397 | 810303 |
| exon | 811767 | 811791 |
| exon | 811871 | 811963 |
| exon | 812335 | 812533 |
| exon | 812745 | 812817 |
| exon | 813772 | 813952 |
| exon | 814460 | 814500 |
| exon | 814911 | 816561 |
| CDS | 810080 | 810303 |
| CDS | 811767 | 811791 |
| CDS | 811871 | 811963 |
| CDS | 812335 | 812533 |
| CDS | 812745 | 812817 |
| CDS | 813772 | 813952 |
| CDS | 814460 | 814500 |
| CDS | 814911 | 815400 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000984 | proteasome core complex, threonine-type endopeptidase activity, endopeptidase activity, proteolysis involved in cellular protein catabolic process, Proteasome thiol oxidase activity, proteasome core complex, alpha-subunit complex, Oxidative_phosphorylation |
| coexpression network | CFinderM001065 | threonine-type endopeptidase activity, endopeptidase activity, proteasome core complex, proteolysis involved in cellular protein catabolic process, Proteasome thiol oxidase activity, Protein_processing_in_endoplasmic_reticulum proteasome core complex, alpha-subunit complex, Retinol_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00085.19 | Thioredoxin | 49 | 141 |
| PF04777.12 | Evr1_Alr | 284 | 324 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016972 | thiol oxidase activity |
| GO:0045454 | cell redox homeostasis |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.