PH01000169G0770's details annotation
1.Annotation
ICBR annotation: triacylglycerol lipase precursor, putative, expressed
Blast result AT5G14180 : 4.90E-58
Blast annotation: Myzus persicae-induced lipase 1
2.Location
Scaffold: PH01000169
Strand: -
| Region | Start | End |
| gene | 520442 | 526404 |
| mRNA | 520442 | 526404 |
| exon | 520442 | 521327 |
| exon | 521427 | 521506 |
| exon | 521850 | 521890 |
| exon | 521978 | 522099 |
| exon | 522255 | 522336 |
| exon | 522661 | 522753 |
| exon | 522894 | 523018 |
| exon | 523760 | 523798 |
| exon | 524089 | 526404 |
| CDS | 520819 | 521327 |
| CDS | 521427 | 521506 |
| CDS | 521850 | 521890 |
| CDS | 521978 | 522099 |
| CDS | 522255 | 522336 |
| CDS | 522661 | 522753 |
| CDS | 522894 | 523018 |
| CDS | 523760 | 523798 |
| CDS | 524089 | 524125 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04083.15 | Abhydro_lipase | 56 | 94 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.