PH01000173G0370's details annotation
1.Annotation
ICBR annotation: armadillo/beta-catenin repeat family protein, putative, expressed
Blast result AT4G33945 : 3.40E-96
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01000173
Strand: -
| Region | Start | End |
| gene | 296315 | 300469 |
| mRNA | 296315 | 300469 |
| exon | 296315 | 296625 |
| exon | 296923 | 297024 |
| exon | 297092 | 297183 |
| exon | 297273 | 297395 |
| exon | 297809 | 297937 |
| exon | 298943 | 299220 |
| exon | 299778 | 300469 |
| CDS | 296502 | 296625 |
| CDS | 296923 | 297024 |
| CDS | 297092 | 297183 |
| CDS | 297273 | 297395 |
| CDS | 297809 | 297937 |
| CDS | 298943 | 299220 |
| CDS | 299778 | 300306 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.