PH01000173G1220's details annotation
1.Annotation
ICBR annotation: phosphate carrier protein, mitochondrial precursor, putative, expressed
Blast result AT5G14040 : 2.00E-145
Blast annotation: phosphate transporter 3;1
2.Location
Scaffold: PH01000173
Strand: -
| Region | Start | End |
| gene | 856458 | 861367 |
| mRNA | 856458 | 861367 |
| exon | 856458 | 856736 |
| exon | 856825 | 856949 |
| exon | 857055 | 857269 |
| exon | 858307 | 858350 |
| exon | 858452 | 858813 |
| exon | 858937 | 858954 |
| exon | 860856 | 861367 |
| CDS | 856667 | 856736 |
| CDS | 856825 | 856949 |
| CDS | 857055 | 857269 |
| CDS | 858307 | 858350 |
| CDS | 858452 | 858813 |
| CDS | 858937 | 858954 |
| CDS | 860856 | 860963 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000519 | LIM Transcription_Regulator(from iTAK) mitochondrial inner membrane, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00153.26 | Mito_carr | 7 | 97 |
| PF00153.26 | Mito_carr | 110 | 196 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.