PH01000180G0940's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G04235 : 1.40E-22
Blast annotation: -
2.Location
Scaffold: PH01000180
Strand: +
| Region | Start | End |
| gene | 657833 | 662938 |
| mRNA | 657833 | 662938 |
| exon | 657833 | 658263 |
| exon | 658626 | 658698 |
| exon | 658822 | 658951 |
| exon | 659329 | 659802 |
| exon | 661602 | 661901 |
| exon | 662283 | 662482 |
| exon | 662617 | 662688 |
| exon | 662917 | 662938 |
| CDS | 657950 | 658263 |
| CDS | 658626 | 658698 |
| CDS | 658822 | 658951 |
| CDS | 659329 | 659802 |
| CDS | 661602 | 661901 |
| CDS | 662283 | 662482 |
| CDS | 662617 | 662688 |
| CDS | 662917 | 662928 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.