PH01000180G1200's details annotation
1.Annotation
ICBR annotation: UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed
Blast result AT4G18230 : 4.80E-70
Blast annotation: -
2.Location
Scaffold: PH01000180
Strand: +
| Region | Start | End |
| gene | 858699 | 863831 |
| mRNA | 858699 | 863831 |
| exon | 858699 | 859722 |
| exon | 861742 | 861884 |
| exon | 861963 | 862112 |
| exon | 862196 | 862255 |
| exon | 862468 | 862622 |
| exon | 862918 | 863831 |
| CDS | 859563 | 859722 |
| CDS | 861742 | 861884 |
| CDS | 861963 | 862112 |
| CDS | 862196 | 862255 |
| CDS | 862468 | 862622 |
| CDS | 862918 | 862957 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT1 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08660.10 | Alg14 | 48 | 225 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| N-Glycan biosynthesis | beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] | ko00510 | K07441 |
| Various types of N-glycan biosynthesis | beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] | ko00513 | K07441 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.