PH01000181G0240's details annotation
1.Annotation
ICBR annotation: AMP-binding enzyme, putative, expressed
Blast result AT3G16910 : 0.00E+00
Blast annotation: acyl-activating enzyme 7
2.Location
Scaffold: PH01000181
Strand: -
| Region | Start | End |
| gene | 189959 | 195381 |
| mRNA | 189959 | 195381 |
| exon | 189959 | 191330 |
| exon | 192698 | 193288 |
| exon | 194622 | 194924 |
| exon | 195079 | 195381 |
| CDS | 190434 | 191330 |
| CDS | 192698 | 193288 |
| CDS | 194622 | 194924 |
| CDS | 195079 | 195195 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00501.27 | AMP-binding | 141 | 526 |
| PF13193.5 | AMP-binding_C | 535 | 614 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.