PH01000196G0550's details annotation
1.Annotation
ICBR annotation: SAM dependent carboxyl methyltransferase, putative
Blast result AT1G19640 : 2.70E-32
Blast annotation: jasmonic acid carboxyl methyltransferase
2.Location
Scaffold: PH01000196
Strand: +
| Region | Start | End |
| gene | 451077 | 453107 |
| mRNA | 451077 | 453107 |
| exon | 451077 | 451263 |
| exon | 451965 | 452234 |
| exon | 452522 | 453107 |
| CDS | 451255 | 451263 |
| CDS | 451965 | 452234 |
| CDS | 452522 | 452890 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03492.14 | Methyltransf_7 | 3 | 212 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.