PH01000197G0760's details annotation
1.Annotation
ICBR annotation: DNA-binding protein, putative, expressed
Blast result AT5G35970 : 6.90E-79
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000197
Strand: +
| Region | Start | End |
| gene | 501421 | 503018 |
| mRNA | 501421 | 503018 |
| exon | 501421 | 501483 |
| exon | 501635 | 501803 |
| exon | 501991 | 502148 |
| exon | 502328 | 503018 |
| CDS | 501481 | 501483 |
| CDS | 501635 | 501803 |
| CDS | 501991 | 502148 |
| CDS | 502328 | 502576 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13087.5 | AAA_12 | 17 | 145 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.