PH01000198G0780's details annotation
1.Annotation
ICBR annotation: armadillo/beta-catenin repeat family protein, putative, expressed
Blast result AT1G61350 : 3.00E-112
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01000198
Strand: +
| Region | Start | End |
| gene | 495398 | 500065 |
| mRNA | 495398 | 500065 |
| exon | 495398 | 498295 |
| exon | 498395 | 498499 |
| exon | 499337 | 500065 |
| CDS | 496635 | 498295 |
| CDS | 498395 | 498499 |
| CDS | 499337 | 499490 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000074 | Ribosome translation, structural constituent of ribosome, intracellular, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.