Annotation of co-expression genes

PH01000206G1300's details annotation

1.Annotation

ICBR annotation: phosphatidylethanolamine-binding protein, putative, expressed

Blast result AT5G01300 : 3.00E-51
Blast annotation: PEBP (phosphatidylethanolamine-binding protein) family protein

2.Location

Scaffold: PH01000206
Strand: +

RegionStartEnd
gene866632867943
mRNA866632867943
exon866632867668
exon867760867943
CDS867099867668
CDS867760867834

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF01161.19PBP77214

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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