PH01000207G0700's details annotation
1.Annotation
ICBR annotation: craniofacial development protein 1, putative, expressed
Blast result AT5G30490 : 2.80E-53
Blast annotation: -
2.Location
Scaffold: PH01000207
Strand: +
| Region | Start | End |
| gene | 505041 | 509050 |
| mRNA | 505041 | 509050 |
| exon | 505041 | 505296 |
| exon | 506340 | 506426 |
| exon | 507320 | 507444 |
| exon | 507543 | 507722 |
| exon | 507977 | 509050 |
| CDS | 505257 | 505296 |
| CDS | 506340 | 506426 |
| CDS | 507320 | 507444 |
| CDS | 507543 | 507722 |
| CDS | 507977 | 508354 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07572.11 | BCNT | 181 | 253 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.