PH01000210G0890's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT3G14200 : 2.20E-34
Blast annotation: Chaperone DnaJ-domain superfamily protein
2.Location
Scaffold: PH01000210
Strand: -
| Region | Start | End |
| gene | 641928 | 644973 |
| mRNA | 641928 | 644973 |
| exon | 641928 | 642855 |
| exon | 643624 | 643686 |
| exon | 643777 | 643847 |
| exon | 644043 | 644136 |
| exon | 644610 | 644973 |
| CDS | 642496 | 642855 |
| CDS | 643624 | 643686 |
| CDS | 643777 | 643847 |
| CDS | 644043 | 644136 |
| CDS | 644610 | 644744 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00226.30 | DnaJ | 20 | 88 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.