Annotation of co-expression genes

PH01000216G0270's details annotation

1.Annotation

ICBR annotation: GDSL-like lipase/acylhydrolase, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000216
Strand: -

RegionStartEnd
gene142837147710
mRNA142837147710
exon142837143936
exon145706145857
exon146417147710
CDS143739143936
CDS145706145857
CDS146417146504

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0016787hydrolase activity

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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