PH01000226G0580's details annotation
1.Annotation
ICBR annotation: ATTIC110/TIC110, putative, expressed
Blast result AT1G06950 : 9.00E-157
Blast annotation: translocon at the inner envelope membrane of chloroplasts 110
2.Location
Scaffold: PH01000226
Strand: -
| Region | Start | End |
| gene | 385033 | 390266 |
| mRNA | 385033 | 390266 |
| exon | 385033 | 386931 |
| exon | 387328 | 388311 |
| exon | 388442 | 388564 |
| exon | 388714 | 388868 |
| exon | 390002 | 390266 |
| CDS | 386680 | 386931 |
| CDS | 387328 | 388311 |
| CDS | 388442 | 388564 |
| CDS | 388714 | 388868 |
| CDS | 390002 | 390077 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16940.4 | Tic110 | 26 | 158 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.