PH01000237G0490's details annotation
1.Annotation
ICBR annotation: O-methyltransferase, putative, expressed
Blast result AT4G35160 : 1.20E-42
Blast annotation: O-methyltransferase family protein
2.Location
Scaffold: PH01000237
Strand: -
| Region | Start | End |
| gene | 352434 | 354756 |
| mRNA | 352434 | 354756 |
| exon | 352434 | 353296 |
| exon | 353940 | 354756 |
| CDS | 352997 | 353296 |
| CDS | 353940 | 354716 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001016 | small GTPase mediated signal transduction, protein transport, GTP binding, Ascorbate_and_aldarate_metabolism Pentose_and_glucuronate_interconversions O-methyltransferase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08100.10 | Dimerisation | 29 | 77 |
| PF00891.17 | Methyltransf_2 | 118 | 344 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
| GO:0008171 | O-methyltransferase activity |
| GO:0046983 | protein dimerization activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.