PH01000243G0160's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G42430 : 3.00E-138
Blast annotation: -
2.Location
Scaffold: PH01000243
Strand: -
| Region | Start | End |
| gene | 76521 | 81376 |
| mRNA | 76521 | 81376 |
| exon | 76521 | 77255 |
| exon | 77656 | 77777 |
| exon | 78120 | 78245 |
| exon | 78338 | 78415 |
| exon | 79260 | 79341 |
| exon | 79629 | 79668 |
| exon | 80256 | 80449 |
| exon | 80597 | 80688 |
| exon | 81019 | 81376 |
| CDS | 77209 | 77255 |
| CDS | 77656 | 77777 |
| CDS | 78120 | 78245 |
| CDS | 78338 | 78415 |
| CDS | 79260 | 79341 |
| CDS | 79629 | 79668 |
| CDS | 80256 | 80449 |
| CDS | 80597 | 80688 |
| CDS | 81019 | 81305 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.