PH01000243G0230's details annotation
1.Annotation
ICBR annotation: protein kinase family protein, putative, expressed
Blast result AT4G35230 : 8.00E-171
Blast annotation: BR-signaling kinase 1
2.Location
Scaffold: PH01000243
Strand: -
| Region | Start | End |
| gene | 118128 | 123723 |
| mRNA | 118128 | 123723 |
| exon | 118128 | 119198 |
| exon | 119290 | 119391 |
| exon | 119493 | 119660 |
| exon | 119852 | 120040 |
| exon | 120489 | 120574 |
| exon | 121160 | 121265 |
| exon | 122144 | 122277 |
| exon | 122552 | 122638 |
| exon | 123190 | 123723 |
| CDS | 118944 | 119198 |
| CDS | 119290 | 119391 |
| CDS | 119493 | 119660 |
| CDS | 119852 | 120040 |
| CDS | 120489 | 120574 |
| CDS | 121160 | 121265 |
| CDS | 122144 | 122277 |
| CDS | 122552 | 122638 |
| CDS | 123190 | 123313 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 56 | 231 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.