PH01000247G0090's details annotation
1.Annotation
ICBR annotation: C2 domain containing protein, putative, expressed
Blast result AT3G14590 : 0.00E+00
Blast annotation: Calcium-dependent lipid-binding (CaLB domain) family protein
2.Location
Scaffold: PH01000247
Strand: -
| Region | Start | End |
| gene | 96672 | 105289 |
| mRNA | 96672 | 105289 |
| exon | 96672 | 98173 |
| exon | 98639 | 98765 |
| exon | 98957 | 99140 |
| exon | 99297 | 99389 |
| exon | 100139 | 100187 |
| exon | 100443 | 100484 |
| exon | 100594 | 100746 |
| exon | 101135 | 101266 |
| exon | 101375 | 101470 |
| exon | 101732 | 101875 |
| exon | 102009 | 102083 |
| exon | 104174 | 105289 |
| CDS | 97349 | 98173 |
| CDS | 98639 | 98765 |
| CDS | 98957 | 99140 |
| CDS | 99297 | 99389 |
| CDS | 100139 | 100187 |
| CDS | 100443 | 100484 |
| CDS | 100594 | 100746 |
| CDS | 101135 | 101266 |
| CDS | 101375 | 101470 |
| CDS | 101732 | 101875 |
| CDS | 102009 | 102083 |
| CDS | 104174 | 104299 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00168.29 | C2 | 288 | 385 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.