PH01000255G1090's details annotation
1.Annotation
ICBR annotation: pre-mRNA-splicing factor ISY1, putative, expressed
Blast result AT3G18790 : 2.00E-97
Blast annotation: -
2.Location
Scaffold: PH01000255
Strand: +
| Region | Start | End |
| gene | 726565 | 727974 |
| mRNA | 726565 | 727974 |
| exon | 726565 | 727974 |
| CDS | 726966 | 727901 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06246.11 | Isy1 | 1 | 290 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Spliceosome | pre-mRNA-splicing factor ISY1 | ko03041 | K12870 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.