PH01000259G0680's details annotation
1.Annotation
ICBR annotation: DNA repair ATPase-related, putative, expressed
Blast result AT2G24420 : 3.70E-67
Blast annotation: DNA repair ATPase-related
2.Location
Scaffold: PH01000259
Strand: -
| Region | Start | End |
| gene | 467586 | 472126 |
| mRNA | 467586 | 472126 |
| exon | 467586 | 467969 |
| exon | 468378 | 468443 |
| exon | 468515 | 468595 |
| exon | 469912 | 470067 |
| exon | 470224 | 470385 |
| exon | 470460 | 470522 |
| exon | 470617 | 470679 |
| exon | 470765 | 470818 |
| exon | 471474 | 472126 |
| CDS | 467703 | 467969 |
| CDS | 468378 | 468443 |
| CDS | 468515 | 468595 |
| CDS | 469912 | 470067 |
| CDS | 470224 | 470385 |
| CDS | 470460 | 470522 |
| CDS | 470617 | 470679 |
| CDS | 470765 | 470818 |
| CDS | 471474 | 471668 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.