Gene details

Annotation of co-expression genes

PH01000271G0440's details annotation

1.Annotation

ICBR annotation: ras-related protein, putative, expressed

Blast result AT4G09720 : 7.00E-57
Blast annotation: RAB GTPase homolog G3A

2.Location

Scaffold: PH01000271
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001588	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, Glycine,_serine_and_threonine_metabolism Valine,_leucine_and_isoleucine_degradation dihydrolipoyl dehydrogenase activity, oxoglutarate dehydrogenase (succinyl-transferring) activity, oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor thiamine pyrophosphate binding, mitochondrial outer membrane,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00071.21	Ras	22	132

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005622	intracellular
GO:0006184	GTP catabolic process
GO:0007165	signal transduction
GO:0007264	small GTPase mediated signal transduction
GO:0015031	protein transport
GO:0016020	membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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