PH01000272G0850's details annotation
1.Annotation
ICBR annotation: DUF630/DUF632 domains containing protein, putative, expressed
Blast result AT2G17110 : 2.00E-67
Blast annotation: Protein of unknown function (DUF630 and DUF632)
2.Location
Scaffold: PH01000272
Strand: +
| Region | Start | End |
| gene | 555439 | 558931 |
| mRNA | 555439 | 558931 |
| exon | 555439 | 555863 |
| exon | 556099 | 556178 |
| exon | 556633 | 556672 |
| exon | 556853 | 557076 |
| exon | 557459 | 558931 |
| CDS | 555801 | 555863 |
| CDS | 556099 | 556178 |
| CDS | 556633 | 556672 |
| CDS | 556853 | 557076 |
| CDS | 557459 | 558194 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04782.11 | DUF632 | 60 | 265 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.