PH01000297G0680's details annotation
1.Annotation
ICBR annotation: ANTH/ENTH domain containing protein, putative, expressed
Blast result AT2G01600 : 2.00E-174
Blast annotation: ENTH/ANTH/VHS superfamily protein
2.Location
Scaffold: PH01000297
Strand: -
| Region | Start | End |
| gene | 470161 | 477258 |
| mRNA | 470161 | 477258 |
| exon | 470161 | 470697 |
| exon | 473884 | 474060 |
| exon | 475883 | 476085 |
| exon | 476174 | 476249 |
| exon | 476316 | 476492 |
| exon | 477099 | 477258 |
| CDS | 470338 | 470697 |
| CDS | 473884 | 474060 |
| CDS | 475883 | 476085 |
| CDS | 476174 | 476249 |
| CDS | 476316 | 476492 |
| CDS | 477099 | 477245 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07651.15 | ANTH | 31 | 309 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005543 | phospholipid binding |
| GO:0005545 | 1-phosphatidylinositol binding |
| GO:0030118 | clathrin coat |
| GO:0030276 | clathrin binding |
| GO:0048268 | clathrin coat assembly |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.