PH01000297G0870's details annotation
1.Annotation
ICBR annotation: lipid phosphatase protein, putative, expressed
Blast result AT3G02600 : 1.80E-67
Blast annotation: lipid phosphate phosphatase 3
2.Location
Scaffold: PH01000297
Strand: -
| Region | Start | End |
| gene | 660550 | 665123 |
| mRNA | 660550 | 665123 |
| exon | 660550 | 661125 |
| exon | 661866 | 661925 |
| exon | 662014 | 662202 |
| exon | 662462 | 662628 |
| exon | 662810 | 662943 |
| exon | 663283 | 665123 |
| CDS | 660902 | 661125 |
| CDS | 661866 | 661925 |
| CDS | 662014 | 662202 |
| CDS | 662462 | 662628 |
| CDS | 662810 | 662943 |
| CDS | 663283 | 663516 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01569.20 | PAP2 | 151 | 254 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.