PH01000299G1260's details annotation
1.Annotation
ICBR annotation: kinase, pfkB family, putative, expressed
Blast result AT1G06730 : 2.00E-122
Blast annotation: pfkB-like carbohydrate kinase family protein
2.Location
Scaffold: PH01000299
Strand: -
| Region | Start | End |
| gene | 816487 | 820689 |
| mRNA | 816487 | 820689 |
| exon | 816487 | 816609 |
| exon | 816827 | 816968 |
| exon | 817083 | 817235 |
| exon | 817912 | 818203 |
| exon | 818341 | 818588 |
| exon | 818950 | 818965 |
| exon | 819271 | 820689 |
| CDS | 816509 | 816609 |
| CDS | 816827 | 816968 |
| CDS | 817083 | 817235 |
| CDS | 817912 | 818203 |
| CDS | 818341 | 818588 |
| CDS | 818950 | 818965 |
| CDS | 819271 | 819644 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00294.23 | PfkB | 135 | 410 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.