PH01000304G0760's details annotation
1.Annotation
ICBR annotation: crcB-like protein, expressed
Blast result AT2G41705 : 5.80E-26
Blast annotation: camphor resistance CrcB family protein
2.Location
Scaffold: PH01000304
Strand: -
| Region | Start | End |
| gene | 606966 | 609405 |
| mRNA | 606966 | 609405 |
| exon | 606966 | 607295 |
| exon | 607421 | 607519 |
| exon | 607832 | 607909 |
| exon | 608035 | 608169 |
| exon | 608219 | 608293 |
| exon | 608584 | 608625 |
| exon | 608878 | 608949 |
| exon | 609083 | 609405 |
| CDS | 607110 | 607295 |
| CDS | 607421 | 607519 |
| CDS | 607832 | 607909 |
| CDS | 608035 | 608169 |
| CDS | 608219 | 608293 |
| CDS | 608584 | 608625 |
| CDS | 608878 | 608949 |
| CDS | 609083 | 609115 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000125 | valyl-tRNA aminoacylation, valine-tRNA ligase activity, tRNA aminoacylation for protein translation, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.