PH01000315G0410's details annotation
1.Annotation
ICBR annotation: DAG protein, chloroplast precursor, putative, expressed
Blast result AT4G20020 : 3.30E-47
Blast annotation: -
2.Location
Scaffold: PH01000315
Strand: -
| Region | Start | End |
| gene | 292225 | 297407 |
| mRNA | 292225 | 297407 |
| exon | 292225 | 292317 |
| exon | 292944 | 293581 |
| exon | 293676 | 293741 |
| exon | 293840 | 293937 |
| exon | 294870 | 294911 |
| exon | 295571 | 297407 |
| CDS | 292306 | 292317 |
| CDS | 292944 | 293581 |
| CDS | 293676 | 293741 |
| CDS | 293840 | 293937 |
| CDS | 294870 | 294911 |
| CDS | 295571 | 295932 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.