PH01000378G0440's details annotation
1.Annotation
ICBR annotation: prephenate dehydratase domain containing protein, expressed
Blast result AT1G08250 : 3.00E-160
Blast annotation: arogenate dehydratase 6
2.Location
Scaffold: PH01000378
Strand: -
| Region | Start | End |
| gene | 282133 | 283817 |
| mRNA | 282133 | 283817 |
| exon | 282133 | 283817 |
| CDS | 282404 | 283684 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00800.17 | PDT | 118 | 296 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| 435 Phenylalanine, tyrosine and tryptophan biosynthesis | arogenate/prephenate dehydratase [EC:4.2.1.91;EC:4.2.1.51] | K05359 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004664 | prephenate dehydratase activity |
| GO:0009094 | L-phenylalanine biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.