PH01000379G0160's details annotation
1.Annotation
ICBR annotation: CSLC2 - cellulose synthase-like family C, expressed
Blast result AT4G31590 : 0.00E+00
Blast annotation: Cellulose-synthase-like C5
2.Location
Scaffold: PH01000379
Strand: +
| Region | Start | End |
| gene | 131251 | 135886 |
| mRNA | 131251 | 135886 |
| exon | 131251 | 133126 |
| exon | 133213 | 133521 |
| exon | 133620 | 133910 |
| exon | 133986 | 134099 |
| exon | 134188 | 135886 |
| CDS | 132380 | 133126 |
| CDS | 133213 | 133521 |
| CDS | 133620 | 133910 |
| CDS | 133986 | 134099 |
| CDS | 134188 | 134832 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT2 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13641.5 | Glyco_tranf_2_3 | 235 | 469 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.