PH01000379G0740's details annotation
1.Annotation
ICBR annotation: peptidyl-prolyl cis-trans isomerase, putative, expressed
Blast result AT2G36130 : 9.30E-38
Blast annotation: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
2.Location
Scaffold: PH01000379
Strand: +
| Region | Start | End |
| gene | 544659 | 547604 |
| mRNA | 544659 | 547604 |
| exon | 544659 | 545888 |
| exon | 545930 | 546000 |
| exon | 546103 | 546164 |
| exon | 546443 | 546576 |
| exon | 547359 | 547604 |
| CDS | 545693 | 545888 |
| CDS | 545930 | 546000 |
| CDS | 546103 | 546164 |
| CDS | 546443 | 546576 |
| CDS | 547359 | 547447 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00160.20 | Pro_isomerase | 81 | 180 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
| GO:0006457 | protein folding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.