PH01000391G0430's details annotation
1.Annotation
ICBR annotation: CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed
Blast result AT4G26100 : 6.60E-70
Blast annotation: casein kinase 1
2.Location
Scaffold: PH01000391
Strand: -
| Region | Start | End |
| gene | 335510 | 340158 |
| mRNA | 335510 | 340158 |
| exon | 335510 | 336483 |
| exon | 336799 | 336883 |
| exon | 337440 | 337510 |
| exon | 337597 | 337692 |
| exon | 337855 | 338003 |
| exon | 339144 | 340158 |
| CDS | 336424 | 336483 |
| CDS | 336799 | 336883 |
| CDS | 337440 | 337510 |
| CDS | 337597 | 337692 |
| CDS | 337855 | 338003 |
| CDS | 339144 | 339219 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 36 | 129 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.