PH01000415G0800's details annotation
1.Annotation
ICBR annotation: HEAT repeat family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000415
Strand: -
| Region | Start | End |
| gene | 506529 | 514601 |
| mRNA | 506529 | 514601 |
| exon | 506529 | 507304 |
| exon | 508244 | 508334 |
| exon | 508610 | 508655 |
| exon | 509066 | 509157 |
| exon | 509559 | 509627 |
| exon | 510084 | 510250 |
| exon | 511735 | 514601 |
| CDS | 507300 | 507304 |
| CDS | 508244 | 508334 |
| CDS | 508610 | 508655 |
| CDS | 509066 | 509157 |
| CDS | 509559 | 509627 |
| CDS | 510084 | 510250 |
| CDS | 511735 | 511897 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13251.5 | DUF4042 | 56 | 86 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.