PH01000426G0470's details annotation
1.Annotation
ICBR annotation: phosphatase, putative, expressed
Blast result AT2G32150 : 1.10E-69
Blast annotation: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
2.Location
Scaffold: PH01000426
Strand: +
| Region | Start | End |
| gene | 318694 | 324108 |
| mRNA | 318694 | 324108 |
| exon | 318694 | 321014 |
| exon | 321124 | 321287 |
| exon | 321408 | 321445 |
| exon | 321872 | 321959 |
| exon | 322101 | 322340 |
| exon | 322923 | 322988 |
| exon | 323891 | 324108 |
| CDS | 320966 | 321014 |
| CDS | 321124 | 321287 |
| CDS | 321408 | 321445 |
| CDS | 321872 | 321959 |
| CDS | 322101 | 322340 |
| CDS | 322923 | 322988 |
| CDS | 323891 | 324094 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13242.5 | Hydrolase_like | 173 | 225 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.